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[GH-ISSUE #30] RIAB: MEASUREMENT riab run succesful but no measurement_concept_id's in OMOP measurement table or in measurement_id_swap in work table #15

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opened 2026-03-23 20:28:32 +00:00 by mirror · 0 comments
mirror commented 2026-03-23 20:28:32 +00:00
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Originally created by @kdenturc on GitHub (Feb 28, 2024).
Original GitHub issue: https://github.com/RADar-AZDelta/Rabbit-in-a-Blender/issues/30

Originally assigned to: @pjlammertyn on GitHub.

@pjlammertyn riab --run-etl . -t measurement works and is succesfull, only labo.sql.jinja and labo_usagi.csv tested
image

but then in GCP there is no measurement_concept_id <>0
image

although in work we see a good upload
image

the measurement concept_id_usagi's are appearing
image

But the measurement_id_swap is not giving measurement_concept_id's, howcome????
image

@sieldep @lbertelo01 please check if you don't have this appearing

Originally created by @kdenturc on GitHub (Feb 28, 2024). Original GitHub issue: https://github.com/RADar-AZDelta/Rabbit-in-a-Blender/issues/30 Originally assigned to: @pjlammertyn on GitHub. @pjlammertyn riab --run-etl . -t measurement works and is succesfull, only labo.sql.jinja and labo_usagi.csv tested ![image](https://github.com/RADar-AZDelta/Rabbit-in-a-Blender/assets/98580512/338ab16c-9736-45e3-ab6e-4c417634f273) but then in GCP there is no measurement_concept_id <>0 ![image](https://github.com/RADar-AZDelta/Rabbit-in-a-Blender/assets/98580512/b47a4786-3a2a-46d4-946e-4c94ed484339) although in work we see a good upload ![image](https://github.com/RADar-AZDelta/Rabbit-in-a-Blender/assets/98580512/6956b96f-1ebb-48c9-9038-ab4a40600819) the measurement concept_id_usagi's are appearing ![image](https://github.com/RADar-AZDelta/Rabbit-in-a-Blender/assets/98580512/85b40443-2b4a-4008-8785-a3ce54167c86) But the measurement_id_swap is not giving measurement_concept_id's, howcome???? ![image](https://github.com/RADar-AZDelta/Rabbit-in-a-Blender/assets/98580512/c31b58b4-7cb5-487e-90ac-aee604679752) @sieldep @lbertelo01 please check if you don't have this appearing
mirror 2026-03-23 20:28:32 +00:00
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