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[PR #2] [MERGED] Photometric interpretation #2

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opened 2026-03-23 20:22:28 +00:00 by mirror · 0 comments
mirror commented 2026-03-23 20:22:28 +00:00
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📋 Pull Request Information

Original PR: https://github.com/sectra-medical/wsidicomizer/pull/2
Author: @erikogabrielsson
Created: 4/25/2022
Status: ✅ Merged
Merged: 4/25/2022
Merged by: @erikogabrielsson

Base: pilot ← Head: photometric_interpretation

📝 Commits (10+)

  • 2a69131 Separate slide data from test definitions
  • 331dde5 Get photometric interpretation from tiler or encoder.
  • 2102563 Fix format
  • 551b44f Test photometric interpretation
  • 2a129dd Test for photometric interpretation after convert
  • b34ecf3 Only YBR_FULL_422 for jpeg
  • d36d009 Test definitions (#22)
  • 3fa2fe7 Make 420 default subsampling
  • e40d41e Merge branch 'main' into photometric_interpretation
  • 4520d33 Merge branch 'pilot' into photometric_interpretation

📊 Changes

15 files changed (+646 additions, -235 deletions)

View changed files

📝 .gitignore (+2 -1)
📝 tests/convert_test_functions.py (+141 -87)
📝 tests/test_convert_mirax.py (+5 -12)
📝 tests/test_convert_ndpi.py (+2 -6)
📝 tests/test_convert_philips.py (+2 -6)
📝 tests/test_convert_svs.py (+2 -6)
📝 tests/test_import_czi.py (+14 -61)
➕ tests/testdata/region_definitions.json (+348 -0)
📝 wsidicomizer/cli.py (+3 -2)
📝 wsidicomizer/common.py (+39 -30)
📝 wsidicomizer/czi.py (+8 -3)
📝 wsidicomizer/encoding.py (+28 -6)
📝 wsidicomizer/interface.py (+8 -6)
📝 wsidicomizer/openslide.py (+13 -4)
📝 wsidicomizer/opentile.py (+31 -5)

📄 Description

No description provided

🔄 This issue represents a GitHub Pull Request. It cannot be merged through Gitea due to API limitations.

## 📋 Pull Request Information **Original PR:** https://github.com/sectra-medical/wsidicomizer/pull/2 **Author:** [@erikogabrielsson](https://github.com/erikogabrielsson) **Created:** 4/25/2022 **Status:** ✅ Merged **Merged:** 4/25/2022 **Merged by:** [@erikogabrielsson](https://github.com/erikogabrielsson) **Base:** `pilot` ← **Head:** `photometric_interpretation` --- ### 📝 Commits (10+) - [`2a69131`](https://github.com/sectra-medical/wsidicomizer/commit/2a691313d40243a82e2f396f8bd3b703ebe29452) Separate slide data from test definitions - [`331dde5`](https://github.com/sectra-medical/wsidicomizer/commit/331dde5a166543030f2b3768b698c333f64e3c66) Get photometric interpretation from tiler or encoder. - [`2102563`](https://github.com/sectra-medical/wsidicomizer/commit/2102563b8b9b7b9545f2026f1b6334d4672d8933) Fix format - [`551b44f`](https://github.com/sectra-medical/wsidicomizer/commit/551b44f2a4ace672500cb62390206d7bec010bd3) Test photometric interpretation - [`2a129dd`](https://github.com/sectra-medical/wsidicomizer/commit/2a129dd771ae70ae202f12152b1cd2f0b3563ade) Test for photometric interpretation after convert - [`b34ecf3`](https://github.com/sectra-medical/wsidicomizer/commit/b34ecf36f90a671ed3ba112a4173c464440ac50b) Only YBR_FULL_422 for jpeg - [`d36d009`](https://github.com/sectra-medical/wsidicomizer/commit/d36d009ade1343abcfe8d8ee91f55a17bc3347f9) Test definitions (#22) - [`3fa2fe7`](https://github.com/sectra-medical/wsidicomizer/commit/3fa2fe7ede2fc980c6aec86f4649a21f172f83b9) Make 420 default subsampling - [`e40d41e`](https://github.com/sectra-medical/wsidicomizer/commit/e40d41e52f8e838a908211188702037660b3432b) Merge branch 'main' into photometric_interpretation - [`4520d33`](https://github.com/sectra-medical/wsidicomizer/commit/4520d33f7328e6cafc725acd769c0456bf8f3560) Merge branch 'pilot' into photometric_interpretation ### 📊 Changes **15 files changed** (+646 additions, -235 deletions) <details> <summary>View changed files</summary> 📝 `.gitignore` (+2 -1) 📝 `tests/convert_test_functions.py` (+141 -87) 📝 `tests/test_convert_mirax.py` (+5 -12) 📝 `tests/test_convert_ndpi.py` (+2 -6) 📝 `tests/test_convert_philips.py` (+2 -6) 📝 `tests/test_convert_svs.py` (+2 -6) 📝 `tests/test_import_czi.py` (+14 -61) ➕ `tests/testdata/region_definitions.json` (+348 -0) 📝 `wsidicomizer/cli.py` (+3 -2) 📝 `wsidicomizer/common.py` (+39 -30) 📝 `wsidicomizer/czi.py` (+8 -3) 📝 `wsidicomizer/encoding.py` (+28 -6) 📝 `wsidicomizer/interface.py` (+8 -6) 📝 `wsidicomizer/openslide.py` (+13 -4) 📝 `wsidicomizer/opentile.py` (+31 -5) </details> ### 📄 Description _No description provided_ --- <sub>🔄 This issue represents a GitHub Pull Request. It cannot be merged through Gitea due to API limitations.</sub>
mirror 2026-03-23 20:22:28 +00:00
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sectra-medical/archived-wsidicomizer#2
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